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H,C and N chemical shift assignments of the SUD domains of SARS-CoV-2 non-structural protein 3c: "the N-terminal domain-SUD-N"

Biomol NMR Assign. 2020-11; 
Angelo Gallo, Aikaterini C Tsika, Nikolaos K Fourkiotis, Francesca Cantini, Lucia Banci, Sridhar Sreeramulu, Harald Schwalbe, Georgios A Spyroulias
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摘要

Among the proteins encoded by the SARS-CoV-2 RNA, nsP3 (non-structural Protein3) is the largest multi-domain protein. Its role is multifaceted and important for the viral life cycle. Nonetheless, regarding the specific role of each domain there are many aspects of their function that have to be investigated. SARS Unique Domains (SUDs), constitute the nsP3c region of the nsP3, and were observed for the first time in SARS-CoV. Two of them, namely SUD-N (the first SUD) and the SUD-M (sequential to SUD-N), exhibit structural homology with nsP3b ("X" or macro domain); indeed all of them are folded in a three-layer α/β/α sandwich. On the contrary, they do not exhibit functional similarities, like ADP-ribose bindin... More

关键词

Covid19-NMR, Non-structural protein, Protein druggability, SARS unique domain (SUD), SARS-CoV-2, Solution NMR-spectroscopy