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Computational design of small interfering RNAs and small hairpin RNAs to silence mutated P53 gene expressions

Informatics in Medicine Unlocked. 2018; 
AnumMuniraShumailaAzamaSaharAslamaAzharMehmoodbG. MujtabaShahcSaeedAmjadbMuhammadYounisbSaharFazala
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Gene Synthesis For the siRNA and shRNA binding to the mutated p53 gene, the targeting sites sequence motifs on the gene are identified through the siRNA Target Finder available at https://www.genscript.com. The common motif is AA(N19)TT or NA(N21), or NAR(N17)YNN where N is any nucleotide, R is purine (A, G) and Y is pyrimidine(C, U), and G + C content ratios. Get A Quote

摘要

RNA silencing is a novel gene regulatory mechanism that confines the transcript level by either preventing translation or by the initiation of particular RNA degradation. Small interfering RNAs are regularly represented as the exogenously made or viral inducers of RNAi. Such small RNAs have been used in biomedical research for particular repression of genes. A small hairpin RNA is an artificially synthesized RNA molecule with a hairpin or loop like structure, that is inserted into the designed siRNA to induce interference. In this research work, computational techniques are used to design the siRNA and shRNA against the P53 gene. Approximately four target sites are identified in the p53 gene to whi... More

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