| Products/Services Used | Details | Operation |
|---|---|---|
| Gene Synthesis | This is a measure to study the high and low used codons in the COI gene sequences. Rare codons are the low used codons, like synonymous codon or stop codon. This was performed using GenScript web server (GenScript rare codon analysis tools) (www.genscript.com/cgi-bin/tools/rare-codon-analysis/) by plotting the codon frequency distribution against the percentage of codons. | Get A Quote |
Synonymous codon usage bias is an inevitable phenomenon in organismic taxa, where synonymous codons occur at uneven frequencies in gene. Synonymous codon usage pattern differs between species and also among the genes of a genome. Codon usage bias is determined under various degrees by mutational bias, natural selection and other factors. In this study codon usage pattern of cytochrome coxidase I (COI) gene of a solitary ascidian Herdmania momus was determined by analyzing the nucleotide content, codon distribution frequency, hydrophobicity, Relative Synonymous Codon Usage (RSCU), Effective Number of Codons (ENC), GC3and Codon Adaptation Index (CAI) values. Results presented low GC content and higher ENC valu... More
