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Gene Synthesis> | Experimental methods Protein expression and purification Ddx4: Constructs for Ddx4 1-236 wild type sequence (UID: Q9NQI0-1) and mutants were synthesized and subcloned into a pET Sumo vector (Genscript) to produce His-SUMO-Ddx41-236 (Nott et al. | Get A Quote |
Protein phase separation is implicated in formation of membraneless organelles, signaling puncta and the nuclear pore. Multivalent interactions of modular binding domains and their target motifs can drive phase separation. However, forces promoting the more common phase separation of intrinsically disordered regions are less understood, with suggested roles for multivalent cation-pi, pi-pi, and charge interactions and the hydrophobic effect. Known phase-separating proteins are enriched in pi-orbital containing residues and thus we analyzed pi-interactions in folded proteins. We found that pi-pi interactions involving non-aromatic groups are widespread, underestimated by force-fields used in structur... More