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Identification and biochemical characterization of a novel exo-type β-agarase Aga3463 from an Antarctic Pseudoalteromonas sp. strain.

Int. J. Biol. Macromol.. 2019; 
LiJiang,XieMaisheng,Gao
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Custom Vector Construction … Fragments 2–5 kb in length were purified using a DNA purification kit (Takara, Shiga, Japan) and ligated into a pUC118 vector that had … plates containing 100 μg/ml ampicillin after 24 h of incubation at 37 °C were picked and used for sequencing by GenScript Biotechnology co … Get A Quote

摘要

An agar-degrading Antarctic bacterium was isolated and identified as Pseudoalteromonas sp. NJ21. This strain showed strong agarolytic activity and could use agar as the sole carbon source for growth. A novel β-agarase gene aga3463 was cloned and identified from the genomic library of Pseudoalteromonas sp. NJ21. It was predicted to encode a peptide of 366 amino acids, including a 21-amino-acid signal peptide. BLAST analysis revealed the deduced amino acid sequence of aga3463 shared less than 36% similarity with any characterized agarase, and phylogenetic analysis showed it belonged to the glycoside hydrolase GH86 family. The recombinant Aga3463 protein had optimal temperature and pH of 50 °C and 7.0, r... More

关键词

Antarctic bacterium,Exo-type β-agarase,GH86 family,Neoagarob