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A simplified strategy for sensitive detection of Rose rosette virus compatible with three RT-PCR chemistries.

J Virol Methods.. 2016-06; 
Dobhal S,Olson JD,Arif M,Garcia Suarez JA,Ochoa-Corona FM.
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Gene Synthesis ... The multi-target APC was artificially synthesized and ligated into a restriction site of pUC57 vector (GenScript USA Inc, Piscataway, NJ) which allows circularization and results in a clonable gene construct. A graphic description of the APC is shown in Fig. 1. ... Get A Quote

摘要

Rose rosette disease is a disorder associated with infection by Rose rosette virus (RRV), a pathogen of roses that causes devastating effects on most garden cultivated varieties, and the wild invasive rose especially Rosa multiflora. Reliable and sensitive detection of this disease in early phases is needed to implement proper control measures. This study assesses a single primer-set based detection method for RRV and demonstrates its application in three different chemistries: Endpoint RT-PCR, TaqMan-quantitative RT-PCR (RT-qPCR) and SYBR Green RT-qPCR with High Resolution Melting analyses. A primer set (RRV2F/2R) was designed from consensus sequences of the nucleocapsid protein gene p3 located in the RNA 3 re... More

关键词

Biosecurity; Diagnostics; HRM; High Resolution Melting; SYBR-Green RT-qPCR; TaqMan RT-qPCR